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ClaMS: A Classifier for Metagenomic Sequences
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Sequencing the fungal tree of life
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Genome sequence of the palaeopolyploid soybean
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Supercharging SIP in the Fungal Hyphosphere
… into a few different groups based on its density — DNA containing isotopes is “heavier” than DNA lacking isotopes. …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … of Texas at Austin produced a high-quality reference sequence of the complex switchgrass genome. The reference … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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Honey Bee Gut Microbiota Divvy Up Dinner
But scientists have wondered exactly how the microbial community carries out its helpful metabolism: who’s … is a division of labor by these bacterial groups. But why the strain variability? The authors think the reason may …
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JGI@25: Roots of a Mutualist Relationship
… and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published … a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a mycorrhizal fungus shifted the focus from …
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Fungus Fuels Tree Growth
… (JGI), a DOE Office of Science User Facility, through its  Community Science Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA … alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ type-strain deposits. All of these …
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Massie S. Ballon
… content on social media. She is also involved in the JGI’s community outreach efforts. Ms. Ballon has a degree in … JGI’s strategic vision, the Institute’s staff and user community. … LBNL Biosciences Area Organizational …
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Jane Grimwood Named HudsonAlpha Genomics Chair
A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples … paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis ). The team of … to the multinational consortium of researchers that sequenced and assembled the simplest cotton genome ( …
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The Expanding Universe of Methane Metabolisms in Archaea
… to environments found on early Earth.”  Through the JGI Community Science Program, Inskeep and McKay recovered … washburnensis) is more distantly related, containing genes for both methane and sulfur metabolisms.” …
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