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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cost and resource requirements of processing these sturdy materials, rumen microbes and their enzymes are an optimal … and then extrapolating data obtained from environmental samples — to identify over 27,000 microbial genes. These … into genes and even into genomes — from these environmental samples,” said Matthias Hess, first author on the paper and …
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get … program managers, and intern alumni will introduce projects designed for students to gain research experience …
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An Earth Month Look at Sustainability Efforts at the JGI
… said. These emissions come from the whole lifecycle of materials used — from their creation to their disposal.  To … the JGI committed to using Stirling freezers to store samples, which use less than half as much energy as other … now IGB-wide ZERO Waste Initiative began its most ambitious project yet: a special recycling program to recycle lab …
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Supercharging SIP in the Fungal Hyphosphere
… which means they offer a lot of insights into how plant materials can be broken down for things like biomass and  … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, have … to the process. This automation lets researchers study more samples and provides better resolution by splitting the DNA …
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Better Genome Editing for Bioenergy
… at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … four genes, including one with no prior known function. The project’s success demonstrates how to sharpen the …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … with the proper permits, to the refuge to collect soil samples from multiple locations. Back in the classroom, JGI …
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Dan Rokhsar
… After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to …
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THE Bioenergy Tree
… poplar an economical and sustainable source of energy and materials. …
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Tracing the Evolution of Shiitake Mushrooms
… A  new analysis takes a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 … work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes these fungi use … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Rex Malmstrom
… a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … also carries out custom preparative work for difficult user projects, including those that require fluorescence … reactions, increase throughput, and enable processing of samples that would not be possible with traditional …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… to the worldwide scientific community through its  User Programs on a competitive, peer-reviewed basis. Speakers and … that the JGI has put together. In collaboration on a project with the Newman lab, an important question arose: … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Matt Blow
… In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome Trust … vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …
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