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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … away in wood, converting it into their own carbon-rich structures, as well as atmospheric carbon dioxide.  Summary … of Energy operated under contract no. DE-AC02-05CH11231. …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis … “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of California, Davis. “The work with JGI …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … varieties that have high productivity across a range of environments is becoming increasingly important for food, … means most genes are found as multiple copies across the chromosomes. “In the past, we needed model systems to test …
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The JGI announces 2024 awardees for our Community Science Program annual call
Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, … large-scale genomic science projects relevant to the DOE’s Office of Biological and Environmental Research (BER) missions in: …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … the microbes within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have … the US Department of Energy under Contract No. DE-AC02-05CH11231. … Leotiomycetes and Coniochaeata lignaria on MycoCosm …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … that combed datasets from around the world, finding over 125,000 partial and complete viral genomes. That study …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … of Energy operated under Contract No. DE-AC02-05CH11231. The work conducted by the National Microbiome Data …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers accepted for 2023. Proposals are …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the … giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this …
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