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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … have been characterized from eucalypts, a group of 900 tree species belonging to the Myrtaceae (myrtle) family and … DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to establish the …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this … , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's areas of focus, major initiatives and more.  …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … that bacteria living within a host (endosymbionts) have on fungal host reproduction, and the reproductive genes they … is highly dependent on the Burkholderia endobacteria to proliferate both sexually and asexually. This dependence is …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant … metabolic changes they’ve undergone. The Impact The number of microbes in, on, and around the planet is an astronomical … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Len Pennacchio
… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in … Investigator proposal to understand the genetic basis of fungal community assembly on dead wood decomposition. She’s …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time …
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The Fungi That Survive In Antarctica
… mighty. They survive everywhere from Antarctica to Joshua Tree National Park, despite extremely harsh conditions. And … organisms survive hotter, drier climates. So University of Tuscia researchers Laura Selbmann and Claudia Coleine are …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … two metabolic pathways “Up to this point, most phylogenomic trees have relied on only one korarchaeotal representative,” …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … Summary Water temperatures and salinity determine how life thrives in the Arctic, and how different types of … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a Common … available but also complementary single-cell sorting and sequencing of viruses together with their unicellular …
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