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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … genomes from across the Fungal Tree of Life, from an international research team in collaboration with the JGI. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol , 2023). These tools have significantly …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, … that the majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences …
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Natural Prodcast Episode 22: Alison Narayan
Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … because I have this question, we have this discussion internally in my group quite frequently. OK, so imagine this … further. So for example, we’ve built a library of flavin independent monooxygenases with the help of JGI’s DNA …
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Project Management Office
… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, …
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Uri Neri
Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document … discovery and analysis, with a particular fondness for RNA viruses – though he'll take a look at anything related … pipelines, he can be found trying to convince others that RNA viruses are actually interesting and not just "spicy …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, … protein parts of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an … Photosynthesizers depend on iron and heme for the light-dependent reactions of photosynthesis, so this was an …
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley … of the JGI. The SAC serves as the Institute's key external advisory panel and advocate of the Institute's … the program. The committee serves as the program's key external advisory panel and advocate of the program's strategy, …
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Crysten Blaby-Haas
… of proteins involved in metal homeostasis. She began her independent research career at Brookhaven National Laboratory … NIH Postdoctoral Researcher, UCLA … Handling Editor, Journal Experimental Botany, 2022 – present  University of … Google Scholar … Education … Awards and Service … Selected Publications …
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Uncovering Novel Genomes from Earth’s Microbiomes
… for multiple applications.       Despite advances in sequencing technologies and computational methods in the … samples around the world, expanding the known diversity of bacteria and archaea by 44%, is now available and  described November 9, …
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