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… Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry … mentors TBK Reddy and Dimitri Stamatis, Porting XML/Python Based Quality Control to Database/Java Based Process in Gold … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving …

… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of … from 118 nominees. The selection process for AAM Fellows is based on their records of scientific achievement and … Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells …

… Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, where he developed novel … and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape …

… cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … A third story from the issue — Machine learning-based prediction of activity and substrate specificity for …

… Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, and to identify and decide on the order in which this fungus breaks down … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model …

… Describing the largest analysis to date of the modified DNA base 5mC variations in … The best-known example of a modified DNA base is a methylation of the base cytosine at the 5th position on its … the need for a more comprehensive exploration of genomic DNA modifications (epigenome).  In  Nature Ecology & …

… below, captions are available) spotlighted the metabolomic analysis capability available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from … analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar …

… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … U.S. Department of Energy, Office of Science, Biological and Environmental Research. Oak Ridge National Laboratory is …

… eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the … of Alaska and Norway, as well as California and Mexico. Based on the study, it would seem that once conditions … like this, researchers would normally craft a genetic clock based on its divergence with a  different species. However, …

… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab … The Deputy of Operations provides oversight and leadership of JGI operations infrastructure, including …

… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This … and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public …

… By characterizing the structure and function of a methylthio-alkane reductase system, … into mechanistic understanding. They engineered a plasmid-based Rhodospirillum rubrum system to overexpress the MAR … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …