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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of … can harvest the sample, then we can put it into the laser system 7. Q: Can radioactive isotopes be used at EMSL? A: … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… more than 10 papers, including two Nature Plants publications, in five years, have come out of the … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities … company LanzaTech to develop a “cell-free” gene expression system. Developed through the JGI DNA synthesis Community …
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Accelerating Metagenomics Discoveries with Deep Learning
… Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … Genome R&D Group and is one of more than 100 scientists and systems engineers involved in computational work at the JGI. … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes … The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … mass spectrometry approaches and model laboratory ecosystems (EcoFABs). …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Development of a Recombineering System for the Acetogen Eubacterium limosum with Cas9 Counterselection for Markerless Genome Engineering
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Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi.
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These …
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Evidence for the widespread distribution of CRISPR-Cas system in the Phylum Cyanobacteria
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