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Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate
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Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications
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Genomic sequencing of single microbial cells from environmental samples
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a … effort. The Science In 1999, the Environmental Protection Agency declared the North Railroad Avenue Plume … the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …
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Metagenomics
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Automated annotation of scientific texts for ML-based keyphrase extraction and validation
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake … that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after … begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … Department of Energy’s goal of producing sustainable fuels from alternative sources. Moreover, the team says the …
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