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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … This study was supported by a PhD scholarship from the China Scholarship … grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community Sequencing …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing … more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI … serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … View the Trifoliate Orange Genome on the Phytozome Portal …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The … chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … cereal crops: It performs C4 photosynthesis, which is the fastest way for plants to convert carbon dioxide and water … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) … just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … More genome copies in switchgrass leads to increased climate flexibility …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … genomes,” Wang explained.  And since microbial genomes are simpler to model than large plant or animal genomes, they … efficiency, the model can process these tokens 150 times faster.  Leveraging Large Data Sets for Smarter AI Any …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. … archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in biomass each year …
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The … paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) …
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