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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …
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The Expanding Universe of Methane Metabolisms in Archaea
… atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of the … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome …
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Massie S. Ballon
… from Wesleyan University, and a graduate certificate in science communication from UC Santa Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s Inclusion, … (PMP) Credential Graduate Certificate, UC Santa Cruz Science Communications Program Bachelor of Arts, Wesleyan …
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Len Pennacchio
… a vision for future technical JGI directions for DOE User science. … Complete Publications Genomic Technologies … in both the energy and health sectors. Mammalian Functional Genomics Lab VISTA Enhancers VISTA Cardiac Enhancer Browser … of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & …
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … Asia. Afterward, Lentinula groups evolved further, to four major groups: a lineage in Australasia and L …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into many more samples and refined our methodology,” Neri said. “Our team grew and so did the …
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JGI Early Career Researchers Featured in mSystems Special Issue
… sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research … National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Reconstructing each cell's genome within complex microbial communities—dream or reality?
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IMG ER: a system for microbial genome annotation expert review and curation
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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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Genomic Signatures for Sedimentary Microbial Utilization of Phytoplankton Detritus in a Fast-Flowing Estuary
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