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… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …

… of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are … such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population and … of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene …

JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …

The JGI’s Community Science Program gives researchers access to all kinds of … episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor …

Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in … with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses …

Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint … Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National …

… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … many species able to occupy the regions where eelgrass flourishes. The plant can thrive in both frigid and tropical … Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … about a multi-year study his student conducted involving fungal rust pathogen resistance. Just as the common gardens …

… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome … Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research interests …

Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant … 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the … Nature 590: 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis enables discovery of …

… determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … skills, wet lab skills and overall connections. Theo Loureaux : I wanted to first discover new methods with tools …