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Igor Grigoriev
University of California, Berkeley, CA … Lankiewicz et al (2023) Lignin deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil …
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Searching for new branches on the tree of life
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Streamlining Regulon Identification in Bacteria
… target genes in 11 of those. That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and … addressed in the study were found to control more than 100 genes, one of which was directly characterized by …
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A Grass Model to Help Improve Giant Miscanthus
… complex genome of  M. sinensis was  recently published in  Nature Communications by an international, … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The collection of the M. sinensis and M. …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Genome Project Standards in a New Era of Sequencing
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The birth of new exons: Mechanisms and evolutionary consequences
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An Automated Tool for Assessing Virus Data Quality
… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … of contamination from the host organism. As reported in Nature Biotechnology , a team from the U.S. Department of … of the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This work was also supported the grant …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data … Enhancers VISTA Cardiac Enhancer Browser ENCODE FaceBase … 2021-  NLM Board of Regents Working Group on “NIH Comparative …
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A Grass Model to Help Improve Giant Miscanthus
… and complex genome of M. sinensis was recently published in Nature Communications by an international, … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The collection of the M. sinensis and M. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… that were acquired through it were usually only around 30% complete.  Described in  ISME Communications , a method … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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