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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … hot springs, an extreme environment with low genetic diversity that would help narrow down potential sources of …
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Bob Schmitz
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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Maureen Berg
Maureen is currently developing new high-resolution and high-throughput methods to link uncultivated viruses to their host. With these new methods, she hopes to expand our understanding of the roles …
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Yasuo Yoshikuni
… of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of … transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains., Microbial …
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Graduate Students Get Thesis Research Opportunity at the JGI
… to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have … to an exceptional caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in … aid the accessibility and reproducibility of my project methods, and I hope that this open-source platform will be …
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JGI on the 2021 Highly Cited Researchers List
JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often … enzymes in specialized metabolism, organisms tend to evolve multiple copies of enzymes, similar to including half a …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. … for the data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a … sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, …
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You Can Move, But You Can’t Hide
… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can … to become an essential tool for researching global viral diversity. geNomad has already been downloaded thousands of …
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Secondary Metabolites Advisory Committee
… scientific relevance and quality. The Committees do not perform management functions nor do they direct the Programs’ …
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