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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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Genome‐wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with genes and centromeres in rice
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Aspects of the Neurospora crassa Sulfur Starvation Response Are Revealed by Transcriptional Profiling and DNA Affinity Purification Sequencing
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DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus
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Igor Grigoriev
… of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … development reveals conserved genes behind complex multicellularity in fungi. Proc Natl Acad Sci U S A. … Ecol Evol . 3(4):668-678. Ahrendt et al (2018) Leveraging single-cell genomics to expand the fungal tree of life.  …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … will target sustainable energy solutions, focusing on lignocellulosic thermophiles and polymer degradation.  “We are … large-scale genomic science projects relevant to the DOE’s Office of Biological and Environmental Research (BER) …
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Fungus Fuels Tree Growth
… matter, or as an endophyte, living between a plant’s root cells. The fungus is almost always found among and within … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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Kanwar Singh
… part of his time assisting JGI users by processing their single cell samples using our high throughput pipeline. He also …
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Crysten Blaby-Haas
… at Berkeley lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … analysis of two extremophilic algae reveals iron economy management. PNAS  120(30):e2305495120. Pasquini M, Grosjean …
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The IMG/M data management and analysis system v.7: content updates and new features.
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