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The Expanding Universe of Methane Metabolisms in Archaea
… archaea likely played a key role in determining the composition of the Earth’s atmosphere and regulating the global … For Guillaume Borrel and Simonetta Gribaldo of the Institut Pasteur in France, the importance of methanogenesis and … all types of anaerobic environments suggest the diversity of methane metabolisms is “vastly underestimated.” In …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy or … Office of Biological and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: the 50th … But for them to be able to pull that water through the whole plant system, they need to open these pores in their … a group of plants in the Agave family with fleshy, sword-like leaves, often with spikes along their edges. …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription … While characterizing sigma factors is the most straightforward application of the technology, in principle, RIViT-seq … assay. The second step consists of RNA sequencing of whole transcriptomes, and the third is determining the …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy or … Office of Biological and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. …
Learn more
JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, an … hackathon led by the Oak Ridge Leadership Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some … Graduate Student Research (SCGSR) program , which awards graduate students the opportunity to pursue part of their thesis research at one of the …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground … carbon, while fungi deliver water and nutrients. In order to do so, these organisms share space at cellular …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Sorghum bicolor (L.) Moench is an African grass that adroitly handles droughts, floods and poor soils. This is the … experiment to uncover the mechanisms behind sorghum’s capacity to produce high yields despite drought conditions. The … or 44% of expressed genes respond to drought stress regardless of whether drought was applied before or after the …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… are available) spotlighted the metabolomic analysis capability available through the  Community Science Program (CSP) . This includes mass … 4. Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New … 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for submitting … Damerow, Berkeley Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, …
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2025 NeLLi Symposium
… and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert … expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial … … Harriet Alexander, Woods Hole Oceanographic Institution (WHOI) John M. Archibald, Dalhousie University Matthew Brown, …
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