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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … from that decay, and deliver those nutrients to tree roots and soil. These fungi help shape a forest’s ecology. … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Trent Northen
… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … genome science capabilities to support BER's mission of achieving a predictive understanding of complex …
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Partners
… The JGI leverages its existing partnerships and develops others … our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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Genome Insider
… Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm … — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … functional genome annotation, improves understanding of the role small molecules play in diverse biological … Find more details on the instrumentation we use and our methodology for metabolite analyses.  …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review procedures and the annual user …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI … Please review our FAQ in advance of contacting the PMO office.  … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work performed …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look … zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work … Chief Informatics Officer …
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