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Webinar: MycoCosm Tutorial
… built based on what is known about the organism’s ecology, mostly based on literature and user community inputs. We also … them for sequencing? A: We do have 1 Amoebozoan, > Dicyostelium purpureum at  https://genome.jgi.doe.gov/Dicpu1 , … of filtering we remove things like TEs, pseudogenes, overlapping models, alternative transcripts, alleles, and …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… is the first to dig into a forest floor ecosystem to discover what carbon- and nitrogen-metabolizing enzymes are …
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Team Science Reveals Important Protein in Poplar
… also grew faster and had increased production of immunity-boosting flavonoids. Conversely, when the gene was overexpressed, those plants had stunted growth, weaker cell …
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Marine Microbe Contains Multitudes
… Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted to … reservoir of carbon on earth; because SAR324 — one of the most abundant organisms in the deep ocean — can fix carbon, … metatranscriptomes and single cell genomes, Boeuf — then a postdoctoral associate in Ed DeLong’s group at the University …
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Viruses Reprogram Cells into Different Virocells
… impacts on the global nutrient cycles regulated by their hosts. For example, microbes that capture and store carbon in … Sullivan used an experimental approach with a marine phage-host model to study virus-host-nutrient interactions. In  their study , which appeared …
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Honey Bee Gut Microbiota Divvy Up Dinner
… degraded mainly by just two clades:  Gilliamella,  which mostly resides in the bee’s ileum, a structure analogous to … the United States, and is working to address some of the most pressing challenges of our time. For more information, …
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Nigel Mouncey
… history. He has a wealth of managerial experience from almost 20 years in the Industrial Biotechnology private sector, … Dr. Mouncey directed R&D teams that focused on the discovery, development and commercialization of novel production … of production sequencing, provides health and safety oversight at the JGI, and plans for the development of …
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Gut Fungi: Unexpected Source of Novel Chemicals
… — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in … O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. Although what …
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Year in Review: JGI’s 2018 Progress Report Available Now
… research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of …
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of … a microbial community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found … shows how the function-driven, single-cell screen can uncover more about cellulose-degrading microbes. The new …
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Busting the Unbreakable Lignin
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Boosting Small Molecule Production in Super “Soup”
… one of the study’s senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the … the United States, and is working to address some of the most pressing challenges of our time. For more information, …
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