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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint … can harvest the sample, then we can put it into the laser system 7. Q: Can radioactive isotopes be used at EMSL? A: No. … air gap, regular atmosphere. It’s kind of hard around some stems of the live plant but we have an approach that we …
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IMG Webinar Series
… of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers … by the U.S. Department of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who has been …
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The Expanding Universe of Methane Metabolisms in Archaea
… Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea … , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. … that “Washburn Hot Springs is a highly-reduced, suboxic system that may be analogous to environments found on early …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New Phytologist , … different locations. They sampled soils in four forest ecosystems, extracted RNA to understand gene expression, and …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, … bacterium was doing in the mangroves. “Mangroves and their microbiomes are important ecosystems for carbon cycling . If …
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Virus-Microbe Interactions of Mud Island Mangroves
… University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science … was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for … and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts comparative …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                   General attendees: $500    … in Seattle, Washington.  Topics included:  Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled … worldwide to explore complex biological and environmental systems using advanced experimental and informatic tools at no …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont interplay using metagenomics. Taking on …
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Igor Grigoriev
… at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists …
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