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JGIota: The Algae Nicknamed ‘Chlamy’
… single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it …
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Better Living Through Bioenergy
… Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, we peek into how scientists Aindrila Mukhopadhyay and Steve Singer are harnessing the versatile bacterium …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By … , scientists have enhanced our understanding of how early plants transitioned from water to land. Key gene … existed in close algal relatives  to terrestrial plants showcases how early plants built upon an ancient genetic …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By … biofuels and bioproducts. This study lends insights on how the fungus has responded to manmade changes in its … This research was supported by the University of Oslo and Norwegian Research Council, the Swedish Agricultural …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal … host — often, a fellow archaeal microbe. Understanding how these hosts and hitchhikers coexist is key for …
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Accelerating Metagenomics Discoveries with Deep Learning
… from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with … difficult to assemble and interpret. The workshop aimed to showcase how researchers are utilizing deep learning to automatically … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in … a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired … the fruiting of soil saprotrophic mushrooms. To date, how the nutritional acquisition of the morel mycelium is …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, … which organisms the viruses may be targeting or infecting, how well the targeted organisms are at fending off the infection, and how long this evolutionary arms race has been going on.  … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Adopt-A-Genome
… but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available … (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani …
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Publication Policy
… to a research project are appropriately recognized and credited for their work, while also adhering to the … the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for …
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The Busy World of Deep Sea Eruptions
… The ocean depths are vast and dark. But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal vents — … Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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