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… production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating … , 2023 Wu et al. Structural characterization of a soil viral auxiliary metabolic gene product - a functional … Cell Chemical Biology , 2022 … R&D100 Award finalist 2019 SIMB Young Investigator Award 2013 Sustainable Biofuels …

… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … structural mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant Gene … et al., 2012. Phytozome: a comparative platform for green plant genomics.      Nucleic Acids Research 40, D1178. …

… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the … and at HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the … of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the …

… peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US …

… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …

… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … study from a JGI-led team uncovered giant viruses in the soil for the first time. The current study applied a … the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this group expanded …

… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … production. A reference genome for the sugarcane cultivar R570 has been  published in  Nature by an international … Phytozome .   … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and …

… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that … new GEBA-Actino genome sequences were combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … concept test, the team reported that the algorithm was over 95% successful at classifying the fungal genomes Support … in correctly predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) …

The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint … and Transcriptomic Analyses for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex …