Results

Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
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Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes.
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Legacy Effects of Cropping System and Precipitation Influence the Core Camelina sativa Microbiome
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A bloom of a single bacterium shapes the microbiome during outdoor diatom cultivation collapse
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Conserved environmental adaptations of stream microbiomes in the hyporheic zone across North America
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Animal-associated jumbo phages as widespread and active modulators of gut microbiome ecology and metabolism
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … paper is the first one to survey a huge amount of natural diversity and say, ‘Yeah, there are genes out there that … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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2024 Progress Report
… the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … A record number of primary users — 2,475 — had active proposals with us, …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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High-density CRISPRi screens reveal diverse routes to improved acclimation in cyanobacteria.
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Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, …
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