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Model Fern Reveals Insight into DNA Thievery in Ferns
… ferns’ secondary metabolites and associated genes are great resources for bioremediation, new agricultural applications … Ceratopteris richardii on Phytozome data portal … Datasets …
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Axel Visel
… Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … for formulation and implementation of scientific policy, engaging in interactions with the scientific …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … technologies have allowed us to build the necessary genome resources to directly test for genes involved in biomass … puzzle with just 50 pieces. The combination of new genetic tools and experimental gardens allow researchers to detect …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … from their soil samples. This gene expression dataset was particularly important for characterizing fungal …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can produce an … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and genetic information has allowed the research team …
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Charting Progress toward Professional Goals
… to projects that will help them build skills and tools, they gain invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at … hi everyone. My name is Deanna Beatty, and I'm a genomic data scientist here at the JGI, and really happy to be here …
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by … it makes its sequencing, synthesis, metabolomics and data analyses capabilities available on a peer-reviewed … being used to integrate the metabolomics and transcriptomic data? A:  We use MAGI. Reference: Erbiligin et al.  MAGI: A …
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Len Pennacchio
… the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA …
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Natural Prodcast Episode 4: Nancy Keller
… Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, … you can think about.   DAN: What kind of genomic resources are available these days for the natural product …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… challenges. But not all scientists have the expertise and resources to do DNA design and synthesis work. This is where … synthesis support, sequencing, integrative -omics, and data mining, empowering research collaborators to take on … screens for characterization of new enzymes and use the data we generated to train machine learning models now …
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Triggering Morel Fruiting
… Morel Mushrooms on MycoCosm Data Portal …
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