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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens
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Webinar: PhycoCosm Tutorial
… for the answer provided by Sara 4.  Q(uestion): Are all CSP produced data automatically assembled and run through … on the synteny page. 7.  Q: What is the success rate for CSP? What makes a successful CSP? A: Reminder: two calls for proposals are open right now …
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Defining a Pan-Genome for Antarctic Archaea
… has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of … primary replicon (chromosome) that is highly conserved and secondary replicons that are highly variable but organized …
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JGI Mural
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Cracking the Secrets of the Diatom’s Shell
… Diatoms, a group of tiny algae, are also known as “living opals” because of the …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of … to have played a key role in the development of life on Earth; the iron-oxide microbial mats at Yellowstone offer researchers an analog for studying early Earth conditions. Additionally, high-temperature …
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Operating Expenses
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Ben Bowen
… Cadillo-Quiroz, H., Garcia-Pichel, F., & others (2015). Exometabolite niche partitioning among sympatric soil bacteria. Nature communications, 6(1), 8289. Yao, Y., Sun, … metabolomics datasets with high-performance computing and metabolite atlases. Metabolites, 5(3), 431–442. Yang, J., …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… incredibly useful for understanding the microbiome of the earth, but most species do not grow easily in the lab. To … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital … with the JGI. Working together, they found most bacterial genomes from water and soil communities were at …
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