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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … creating new opportunities for breakthrough discoveries and catalyzing a major transition of biology into data science.  …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … energy. As reported January 28, 2019 in Nature Communications , two research teams joined forces and data sets to … by a common ancestor to all five lineages. In the lab of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI …
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Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b
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Draft Genome Sequence of Monaibacterium marinum C7T, Isolated from Seawater from the Menai Straits, Wales, United Kingdom
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), have unveiled …
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Accessibility/Section 508 Statement
… The U.S. Department of Energy is committed to making its electronic and … with disabilities in accordance with Section 508 of the Rehabilitation Act (29 U.S.C. 794d), as amended in …   Send feedback or concerns related to the accessibility of this website to DOE Section 508 Coordinator mailbox.   …
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Strain Engineering
… The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … chromosomally integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The … roles in various environments and their potential applications. By recovering population genomes from metagenomes, …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — for …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … survival of the microorganisms that live there.  A  Communications Biology article highlights how one microalga … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). In their …
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