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… The Impact Traditional methods for breaking down biomass use aerobic methods (those using oxygen) to remove lignin and transform the remaining … into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify lignin without oxygen and make …

… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … technologies and computational approaches, more and more virus sequences are being recovered and identified from … the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous effort, an …

… sigma factors that initiate transcription in bacteria. Using this technology, which combines an in vitro … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … be applied to biotechnology and medicine. A more robust understanding of these microbial communities could lead … separate, seawater seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of 50 letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew …

… different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. … the metabolisms that SAR324 and other microbes use could inform scientists’ understanding of carbon fluxes …

… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … comprised of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two main … Fungus Genome on MycoCosm data portal …

… The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short Palindromic Repeats … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. The sequences were then … across many areas. In particular, gene editing is being used to develop drought, flooding, pest-resistant, and …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, …

… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … effort, researchers have identified a protein in soil viruses that may promote soil health. The work was enabled in … Research (BER) and is a contribution of the Scientific Focus Area “Phenotypic response of the soil microbiome to …

… genomics can add significant value to the other commonly used culture-independent sequencing approaches including … the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to biotechnology and … tools have helped decode the genomes of tens of thousands of previously unknown and uncultivated microbes …

… off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, scientists long held … source of antibiotics. Indeed, these anaerobic fungi may be using these compounds for self-defense. But the compounds …