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Fungal Friends or Foes in Plant Roots
… fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … toward filling gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … degrade the plant biomass. In order to learn more about these regulatory networks in the model fungus  N. … tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was …
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Chapter Twelve Genomics for Key Players in the N Cycle From Guinea Pigs to the Next Frontier
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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You Can Move, But You Can’t Hide
… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the … the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the …
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Finding the Fermenters
… of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. … records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … led the work in collaboration with JBEI as part of the 2021 Laboratory Directed Research and Development (LDRD) … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … video below to see what some of the interns had to say about their time at the lab. …
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … programs – some managed by the Lab – to learn more about their experiences. Jehan Jacobs participated in the … it? Jehan Jacobs : I have a poster session actually, like just a couple days from now. So I've been thinking about …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more …
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