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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… leaving potential targets for crop engineering untouched. Research recently published in  The Proceedings of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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How Filamentous Fungi Sense Food
… California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … to acquire carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated …
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New and Improved: Eucalyptus Reference is Now Accessible
… The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … help from researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … and development and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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1001 Proteomes: a functional proteomics portal for the analysis of Arabidopsis thaliana accessions
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An Addiction Crucial to a Fungus’ Reproduction
… relies on bacteria to regulate key components of its reproductive machinery The Science To better understand how … and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported in the November 29, …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … in an effort to create improved varieties for biomass production. He did his postdoctoral studies at the Carnegie … interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the …
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