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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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SPRUCE-ing Up Science
… the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the … despite global warming.  At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and computer … to develop a tool that leveraged machine learning to help users determine which computer program would best serve …
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JGI Launches Latest Strategic Plan
… milestones. JGI Director Nigel Mouncey credits JGI Science Program Deputy Axel Visel for driving the monumental effort, … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …
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Picking Up Threads of Cotton Genomics
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the HudsonAlpha … breeding into cotton,” said Schmutz, who heads JGI’s Plant Program. He and Grimwood were also part of the JGI team that …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a HudsonAlpha … of whole genes,” Kellogg agreed. “Getting that information is hard. There’s a good reason nobody’s done it; …
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When “The Blob” Made It Hotter Under the Water
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Hallam’s approved proposal through the Community Science Program . The proposal focuses on uncovering the metabolic … Energy (DOE) Joint Genome Institute, an Office of Science User Facility, supported by the Office of Science of the …
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Rex Malmstrom
… a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … also carries out custom preparative work for difficult user projects, including those that require fluorescence …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and … DOE Office of Science as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, reached this milestone with … JGI Science Deputy and a co-founder of the internship program, this type of achievement is especially rewarding. … Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of the fittest” theory — …
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Probing the active fraction of soil microbiomes using BONCAT-FACS
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Protein structure determination using metagenome sequence data
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Microbial species delineation using whole genome sequences
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