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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… the primary author on this publication and drove the entire project, Visel explained. She continued working virtually … Practical Applications for Fungi Wint began working on the project that culminated in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev …
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JGI Workshops at PAG
… of plant systems. We will describe how to apply for a project with the JGI Community Science Program and how you …
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Tanja Woyke Elected to American Academy of Microbiology
… honor,” said Axel Visel , JGI Deputy for Science Programs. “It clearly speaks to the enormous impact her … to have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to … and environmental genomics.” Along with Woyke, two JGI users were also elected to the AAM: fungal researcher Jason …
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JGI Hosts GPU Hackathon in May
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … reputation in the community,” said JGI Chief Informatics Officer Kjiersten Fagnan of the upcoming event. “The tools …
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Crysten Blaby-Haas
Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … she joined LBNL to spearhead the development of a joint user capability between the JGI and Molecular Foundry for … analysis of two extremophilic algae reveals iron economy management. PNAS  120(30):e2305495120. Pasquini M, Grosjean …
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The widespread IS200/605 transposon family encodes diverse programmable RNA-guided endonucleases
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Filling in the Plant Tree of Life
… are from narrow swaths of the plant tree of life. One project aims to change that. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Computing Center (NERSC) , another DOE Office of Science User Facility located at Berkeley Lab. Principal …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Rex Malmstrom
… a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … also carries out custom preparative work for difficult user projects, including those that require fluorescence …
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