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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Four Researchers Join JGI User Executive Committee
… Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome … the broader community. Eisen has been involved in many JGI projects, both as a CSP PI and as a collaborator. He … development and initiation of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) project. As a UEC member, he …
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Honey Bee Gut Microbiota Divvy Up Dinner
… yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota … Academy of Sciences . The team focused on the dominant bacterial clades shared between honey bee and bumblebee gut … in the bee’s ileum, a structure analogous to the human small intestine; and  Bifidobacterium,  which dwells …
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How Microbes Can Protect Plants in Drier Straits
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Escalation in the host-pathogen arms race: A host resistance response corresponds to a heightened bacterial virulence response
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A Community Resource for Secondary Metabolite Researchers
… BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The …
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Natural Prodcast
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Fishing for Novel Cellulose Degraders
… cell sorting to sort cells into several small pools, followed by whole genome amplification and … shotgun sequencing. The team first tested the approach on bacterial laboratory models to set a reference for its … a new genus level member of the novel candidate phylum Goldbacteria. They’ve proposed the name  Candidatus …
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Extracting the Secrets of Secondary Metabolites
… pest control. Secondary metabolites are highly regulated in bacteria, making it difficult to identify which pathway … could potentially allow for introducing CRISPR into other bacteria, thereby enhancing the scientific community’s …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… biosamples in GOLD. “Besides these, he curated several small sets of phylogeny, biosample metadata tasks we …
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Tracking the Origins of Methane-Producing Microbes
… to these samples by sorting the microbes into small pools of cells that were then sequenced separately. …
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