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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on … head.  Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative where she leads infrastructure …
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Nigel Mouncey
… a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a … He is also on the Leadership Team of the National Microbiome Data Collaborative and served as President of the … 33 pending. Includes: Enhancing spinosyn production with oxygen binding proteins. (2014) U.S. Patent Application …
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MGM Workshop at Fisabio Summer School 2026
… research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes
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Fungal & Algal Program
… carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem … functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or … and integrate multi-omics tools to enhance functional studies. These efforts seek to improve understanding of how …
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Webinar: SIP technologies at EMSL and JGI
… EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … time has been impacted by the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for … narratives, or plans to develop narratives in KBase for SIP studies? I’d be interested in how it could possibly be …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… language of biology — and primed for integration with artificial intelligence tools.  LLMs aren’t just for … health care to the financial sector — whether to identify studies and protocols or analyze and predict market trends. … ecological Harvard Forest project, large datasets from soil microbiome studies collected across various terrains, and …
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Genome‐Wide Association Study Identifies Candidate Loci Underlying Agronomic Traits in a Middle American Diversity Panel of Common Bean
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A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
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