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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a global analysis of the diversity, distribution, and evolution of virophages.” Lead author David Paez-Espino  …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … the virosphere Keynote Talk Title : “Redefining Virus Macroevolution” Edward Holmes is an evolutionary virologist at …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … Genome Inside: THE Bioenergy Tree …
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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Novel Hydrophobins from Trichoderma Define a New Hydrophobin Subclass: Protein Properties, Evolution, Regulation and Processing
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Multiple Origins and Rapid Evolution of Duplicated Mitochondrial Genes in Parthenogenetic Geckos (Heteronotia binoei; Squamata, Gekkonidae)
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Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … and elsewhere provide researchers with insights into the evolution of life on Earth. For decades, longtime JGI … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex Chromosomes in the Moss Ceratodon 7:09 PM …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this approach would be greatly increased by having the …
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