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In-depth Spatiotemporal Characterization of Planktonic Archaeal and Bacterial Communities in North and South San Francisco Bay
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … that discovery, DGRs have been found in other viruses, bacteria, and archaea. But how widely distributed they are, and the roles …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as … JGI colleagues have developed a technology called chassis-independent recombinase-assisted genome engineering (CRAGE), …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal … genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria did; contemporaries Melainabacteria and Sericytochromatia, members of the same clade …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … genomes from across the Fungal Tree of Life, from an international research team in collaboration with the JGI. …
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Daniel Udwary
… for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the JGI, he spent time … (1996) … List available on Google Scholar … Education … Publications …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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