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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The … mass produce identical droplets that serve as reaction chambers, and also allows them to test composition variants. … producing high value bioproducts. Global temperatures have been rising caused by high levels of carbon dioxide in the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide … basis. Speakers and attendees from many corners of the globe joined  this hybrid event , either in person at Lawrence … (Berkeley Lab), or from afar, online. Each day, a keynote speaker addressed the conference, sharing the journeys …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality … A reference genome for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. … pipeline and techniques. High quality primary assembly not only includes a full representation of the diversity …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A … keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … of extreme weather events such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 … branches of eukaryotes (organisms with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence and …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … available datasets. They’ve discovered that DGRs are not only widespread, but also surprisingly active. In … was part of the DOE Joint BioEnergy Institute ( http://www.jbei.org ) supported by the Office of Biological and …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components … into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify lignin without oxygen and make … It’s that third component, lignin, that has historically been less of a resource to be extracted and more of an …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully … However, AMF and the microbial communities they inhabit are notoriously difficult to study, due to the difficulty …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … computational approaches, more and more virus sequences are being recovered and identified from environmental samples … the virus-host boundary clearly defined using functional annotation methods, it was possible to distinguish between …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant … research projects.  More recently, these long-reads have been applied to DNA methylation analysis as well as … but currently require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of …
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First Monoploid Reference Sequence of Sugarcane
… genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have … diploid species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a … breeding methods using molecular biology techniques has been hampered by the crop’s highly polyploid genome, which …
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