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Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven … ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, who … in my project was worth it whenever I was able to get a single line of code working and get the desired final …

Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and … of this field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic …

… into how the multiple chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the … sinensis was  recently published in  Nature Communications by an international, multi-institutional team. The work was a joint effort led by scientists at the  Center for Advanced Bioenergy and …

… tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called … to any type of lignin breakdown — and lignin breakdown by anaerobic fungi therefore thought to be impossible.  And … which requires getting through the lignin.  Researchers led by Michelle O’Malley’s lab at the University of California …

… on, scientists can determine the level of gene expression by the gradations. The Impact Metabolic engineering could … characteristics in an organism. The experiment was led by Hal Alper, professor and associate chair at the … the production of betaxanthins. They used combinations of single guide RNA, or a single RNA piece that recognizes a …

FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research …

Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans could do … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to study microorganisms that can’t be cultured by analyzing and then extrapolating data obtained from …

… reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … improve the genome’s accuracy, and increase its length by 29.5 Megabasepairs. 2017: Pan-genome analysis of sorghum … ( 2017 ), have identified many more genes than found in the single reference genome, including traits useful for …

… the question, well, how are the microbes being affected by the metals? When metals are introduced, how do they adapt … to be where we’re going to level off. And that’s in a single lifetime, right? Or maybe two generations. And so, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… plants can’t run away, they’ve evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by microorganisms — out,” said JGI user/collaborator … standards.  A year later, her team used proteomics, genomics and transcriptomics to discover another advantage …

… office building, its roots are akin to the ground floor lobby. People walking into the lobby have many reasons for … plants (endophytes). These include genes that degrade plant cell walls and break down plant sugars. The results also … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …