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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … studied? Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps … comparable study, where plants were subjected to three nitrogen sources (urea, ammonium, and nitrate) as the …
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Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential
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A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
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Whole genome assembly from 454 sequencing output via modified DNA graph concept
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Draft genome sequencing and assembly of Favolaschia claudopus CIRM-BRFM 2984 isolated from oak limbs
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The architecture of resilience: a genome assembly of Myrothamnus flabellifolia sheds light on desiccation tolerance and sex determination
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … always found among and within poplar trees, and in an effort to understand its influence on the plant, a team of … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Evaluation of inducible promoter–riboswitch constructs for heterologous protein expression in the cyanobacterial species Anabaena sp. PCC 7120
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … Program . The comparative framework provided by these high quality reference genome sequences could help researchers better … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … to >70% completeness. Of those 79 genomes, 26 were high-quality draft genomes with >90% completeness. These results, …
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