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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the … of University of Massachusetts-Amherst, who represent the scientific areas of plant genomics, DNA synthesis and …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters … Lawrence Berkeley National Laboratory Outstanding Scientific Achievement Award (2022) ASM’s USFCC/J. Roger …
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Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
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Pyrophosphate-free glycolysis in Clostridium thermocellum increases both thermodynamic driving force and ethanol titers
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular features to large … data set will help identify how different elements of the ecosystem interact and respond to changes in the …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis has been …
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Genetic Associations in Four Decades of Multienvironment Trials Reveal Agronomic Trait Evolution in Common Bean
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Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes … a 2014 Berkeley Lab Director’s Award for Exceptional Scientific Achievement , and was among the Lab’s 2015 Women …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … CheckV, assesses viral genomes, and grades their quality based on completeness. Along with expanding the viral …
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