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… exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When … even know how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of … power of more than 26,000 microbiome datasets, all accessible through the publicly available  Integrated …

… with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors to practice and develop presentation skills as well as … worked on ranged far and wide — from implementing new data visualization tools, to using natural language …

… By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … Virus)—for the virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, including over 28,000 … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and nutrients. … his team then linked those species-level observations with data on microalgal communities across different ocean … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta Gribaldo of … the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) …

… are interested in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying the microbial … Rauer Islands. Additionally, they compared metagenome data generated from samples collected at four Rauer lakes to … Samples on IMG/M Data portal …

… has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio …

… and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, the team aims to broaden awareness of and access to JGI public resources and the DOE mission, as well … is the JGI's Communications and Outreach Manager. Click to see the coverage of JGI-enabled science highlighting user …

… the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research … sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required for …