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High-quality RNA extraction and the regulation of genes encoding cellulosomes are correlated with growth stage in anaerobic fungi
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this polar environment. This cycle suggests a reliance on …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their … below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative and …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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David Goodstein
… focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine (www.intermine.org) … Education … Selected Publications … Awards and Service …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof …
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, mobilize nutrients from that … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … … Volland et al. 2022. A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound … User Programs … Education … Awards and Service … Selected Publications …
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