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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus dynamics in … of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Novel Features of the Polysaccharide-Digesting Gliding Bacterium Flavobacterium johnsoniae as Revealed by Genome Sequence Analysis▿ †
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut … Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that showcase our collaborations and capabilities to enable great science that will help solve energy and … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …
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Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1)
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Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95T)
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Complete genome sequence of the gliding freshwater bacterium Fluviicola taffensis type strain (RW262T)
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome … Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell …
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