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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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Transcriptomic Analysis of the CAM Species Kalanchoë fedtschenkoi Under Low- and High-Temperature Regimes
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Activity‐Informed Network Analysis Reveals Keystone Microbes Shaping Freshwater Ecosystem Function
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … also thrive in areas that receive a lot of rain.  Previous analysis of the E. grandis reference genome, an … duplicate arrays, these genes are prone to rapid genetic expansion which partially explains the great variety of …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … the first legume species with a published complete draft genome sequence. At the time, the vital global source of … soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately spurred further research and …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. … from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis is one of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Moreover, the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … level. Because the annotations are standardized and span the full kingdom, they are well-suited to train machine … evolutionary processes. The team then extended their analysis beyond the reference set, using two additional …
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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Metatranscriptomic array analysis of ‘Candidatus Accumulibacter phosphatis’‐enriched enhanced biological phosphorus removal sludge
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Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution
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