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Genome Project Standards in a New Era of Sequencing
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New Research Sheds Light on Diversity in the Deep Sea
… seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, … and functioning of a given microbial community. Scientists with the U.S. Department of Energy Joint Genome Institute, a … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …
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Zhong Wang
… scientists and biostatisticians. Through collaborations with internal and external scientists, the Wang group has … data analyses and software to enable “grand-scale” scientific projects. These solutions include large-scale … metagenome binning software … Education … Selected Publications … Software …
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Emiley Eloe-Fadrosh
Scholar … LBNL Director’s Award for Exceptional Early Scientific Career Achievement, 2020 NIH Early Career … Foundation; Gordon and Betty Moore Foundation; Schmidt Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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The Case for Conservation
Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome … heavy metal contamination, and drought. The moss genomes’ metabolic pathways could lead to the discovery of … an answer is in sight for a similar question. In a recent Scientific Advances article , a team led by McDaniel and his …
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SIPs with Standards
… are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a … reproducible, more reusable, and more insightful, for the future of studying microbial communities.   …
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Events
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An Integrated Dataset to Understand Ecosystem Interaction
… and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular features to large … revealed key metabolic pathways and metabolites associated with the tree’s stress response. Finally, using … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Cultivating Symbiotic Antarctic Microbes
… of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … genome sizes and their cells were not observed to associate with host cells. In the  Proceedings of the National Academy …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. … that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Genomes OnLine database (GOLD) v.7: updates and new features
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