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… with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial … is, they are similar to previously known genes from isolate organisms, but we still aren’t sure of their function.  … marine ecosystems, etc.  “So, they must be doing something interesting or important for that habitat,” Pavlopoulos …

… key colonization events in the Atlantic ocean occurring within the last 40,000 years. The Impact Eelgrass represents … Population and evolutionary genomics of host–microbiome interactions in Zostera marina and other seagrasses). The …

… extracted from a variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they …

… Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that control many … which can affect pathogenic and symbiotic bacterial interactions with animals and plants, or cause metal … for the E. coli cyclic di-GMP binding protein, Ec YcgR, within the Nano-lantern scaffold. They then mined sequence …

… hazardous waste areas that require cleanup and long-term monitoring. The DOE has been similarly invested in …

… and CRAGE technologies. While CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool … of robust tools available for carrying CRISPR into microorganisms. CRAGE (Chassis-independent Recombinase-Assisted … to identify strains able to produce secondary metabolites within a lab environment, shining a light into this …

… are present in a sample, to generate data about which organisms are active, and which microbes are eating what,  … and participation — is especially important in microbial ecosystems. These communities harbor tens of thousands of … aligned with FAIR principles (Findability, Accessibility, Interoperability, and Reusability) for data reuse.  In the …

… strains. (Blake Rasor) Think of cells as tiny factories: within their walls they have both the machinery to make … is that we’re doing work in yeast, a key platform organism that has been used historically for making … lab to provide a seamless transition between the  in vivo  (within the cell)and  in vitro  (outside the cell) efforts of …

… was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s Office of Energy …

… — in soil, the sea and, of course, the cells of other organisms. As they infect microbes like bacteria, algae and … invisible to the sampling experiments probing Earth’s ecosystems. Viruses rarely grow well in environmental … was called IMG/VR. It featured samples from different ecosystems all over the world, including 3,908 isolate …

… investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place … can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and …

… Matt is broadly interested in the interactions between microbial life and environment, and … considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and FICUS user …