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Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
Cristhian Gutierrez Huerta (2015 undergraduate intern): Just graduated from UC Merced and starting the Helena O. … with Igor Grigoriev. Portia Mira (2016 graduate intern): Just started postdoc at UCLA and also received the UCLA …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … tools have uncovered a diversity of viruses that infect not just crops, animals and humans, but also microbes whose … viruses is just the beginning. “I often say that just identifying a sequence as viral is not even half the story.” …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … the goal is to create an entirely human-generated yeast genome. …
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The Case for Conservation
… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the … applications. These applications include crop improvement insights that could benefit candidate biofuel crops. Summary … answer is in sight for a similar question. In a recent Scientific Advances article , a team led by McDaniel and his …
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Jane Grimwood Named HudsonAlpha Genomics Chair
City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … soon after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford … Center (Danforth Center), HudsonAlpha and the JGI also identified a gene related to seed dispersal in wild populations …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” … Roland Hatzenpichler , Montana State University   Joint Genome Institute Organizers: Frederik Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … PhycoCosm has many components that make it useful for scientific inquiry: it shows a full phylogenetic tree of more …
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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research … to isolate genome data, our real-world touchstones, we’re just scratching the proverbial Petri dish,” Seshadri said. … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801T)
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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Finding the Fermenters
… including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … and Environmental Research (BER) program to enable scientific discovery in support of the DOE mission. Fermentative …
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