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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … groups joined the project to contribute to the data for six new species. I must mention that some of the members from …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Computationally Classifying Fungal Lifestyles
… part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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From Competition to Cooperation
… mycorrhizal species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Yasuo Yoshikuni
… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … of non-model yeasts for production of biofuels and renewable chemicals, developing genome engineering tools for … board member of Synthetic Biology (Oxford Journal) Review committee member of International Journal of Molecular …
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Ian Blaby
… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a custom high-throughput … and Synthetic Biology JGI Co-chair, People Stewardship committee (2020-2022) UCLA Molecular Biology Institute …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Post-doc in Metabolomics, The Scripps Research Institute Executive Education, UC Berkeley Haas School of Business DOE …
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MGM Workshop at Fisabio Summer School 2025
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