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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Ken Chu
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Better Genome Editing for Bioenergy
To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective against 94 percent of the genes in a lipid-prolific yeast. The Impact … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held …
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Understanding Wildfire Recovery, Starting in Soil
… clearer picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed under the …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 … staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives highlighted …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the … molecules transcribed from all the genes within a cell or tissue at a specific time or under specific conditions – in …
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Draft genome sequence of carbapenem-resistant Shewanella algae strain AC isolated from small abalone (Haliotis diversicolor)
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A Complex Confection Decoded: Sugarcane Reference Genome
… major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … Phytozome .   … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … which is best for the task at hand. “There are at least 30-40 programs and it is not clear which are the best to use,” … a presentation on their data to a large group of DOE JGI researchers at the end of their internships, and are …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ability to adapt to stress and rapid environmental changes. Researchers were able to identify specific genes that allow … in more nutrients to fuel growth. The Impact Over the last 40 years, summer sea ice in the Arctic has decreased by more … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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