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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) …
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Experimental Evolution of Extreme Resistance to Ionizing Radiation in Escherichia coli after 50 Cycles of Selection.
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Tracking the Origins of Methane-Producing Microbes
Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
Biology Who’s Invited? All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 … Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek Featuring a casual, candid, C-level panel discussion with … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGI-KBase Panel at SACNAS
Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This … contribution they make, whether as part of a course or internship, and before ever publishing a research article. … National Labs, User Facilities and Programs, and introduce best practices for anyone to get credit for their …
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Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost
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I-Min (Amy) Chen
… research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of the Integrated Microbial Genomes (IMG) family of …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to their environments, two gene families—peroxidases and nucleotide-binding leucine-rich repeats (NLRs) —stood out for …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high … own high school biology teacher, who helped connect me with internships and training at the Clorox Company and Lawrence …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, when they set out … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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