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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … about how microbes have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the … Antarctic lakes and offers a genetically-tractable model system that could help researchers better understand the …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the past … a teaching assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … for injecting a solution that bolsters the immune system of oaks and enables them to fend off the effects of …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more efficiently. Summary … Advanced Research on the Biology of Tree and Forest Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … of which were shared with previous studies in the same system. With the right functional characterization, those … This work focused on a relatively well-understood model system, so future directions will also include targeting …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in … research, written skill, above all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome … said. “Fungi play an important role in the earth’s ecosystem,” said Salamov, one of Wint’s mentors and a data …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … LanzaTech to develop a “cell-free” gene expression system. Developed through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to test enzymatic pathways, which …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … The proposal targets the CSP focus area in plant microbiomes, as well as those in inter-organismal … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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