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Tanja Woyke
… Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont … metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell … The Deputy of User Programs also acts as a liaison to our partner institutions, funding agencies and the broader …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … the Biosciences Area and among our Berkeley Lab colleagues, particularly with the other user facilities including the …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental … (APS) at Argonne National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of … your project in the right scope. Q4: What can I ask for as part of the FICUS call? A: You are not asking for money. We …
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JGI announces final round of 2022 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six researchers accepted for 2022. Proposals are accepted year-round; the next deadline is …
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The Case for Conservation
… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the … effort. The Impact Found on all continents, including Antarctica where it is a major part of the flora, fire moss has adapted to conditions such …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding wild … to harness species diversity in traits relevant to U.S. Department of Energy (DOE) missions in energy and environment. …
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron …
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Webinar: PhycoCosm Tutorial
… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish the data sets the trees are … are being added. We do plan to publish the tree or their parts and data it is based on 3.  Q(uestion): Can you please …
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Forming Scientific Connections and Building Community
… from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Mentors: Jessen Bredeson & Albert Wu Project: “ Pangenome de Bruijn Graph Simplification ” Peter Nguyen : …
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