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Guttation capsules containing hydrogen peroxide: an evolutionarily conserved NADPH oxidase gains a role in wars between related fungi
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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae▿
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User Executive Committee Charter
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new … — but the experts we were able to work with on this project to ask questions about structure and function,” … share. The end result was a list of genes, termed  The GreenCut2 Resource . It details 597 genes coding for …
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Access to Rock Star Scientists
… Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The … internship has further confirmed by desire to pursue a STEM career, specifically in a government lab. My favorite thing … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. …
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Understanding Wildfire Recovery, Starting in Soil
… soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … DOE Office of Science National User Facilities in a single project. … were performed under the Facilities Integrating Collaborations for User Science (FICUS) initiative and used resources …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, … After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to …
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … to large and even giant. The genomes of giant viruses are on the order of 100 times the size of what has typically … may in turn impact the host communities and their roles in carbon and other nutrient cycles. “This is the first study …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded … in genomes.” He’s working with Rokhsar on a newer genome project, and enjoys the fact that he can use what they’ve …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… surfaces of plants and their roles in plant health and environmental processes. The Science In a recent Microbiome paper … through their diverse genomic capabilities. Summary In a project supported by the JGI Community Science Program, … atmosphere. The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the … shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial … questions, methodical problem-solving, and hard work have carried it through the difficult early stages, so I can …
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